VirMet: a set of tools for viral metagenomics
VirMet is a software suite designed to help users running viral metagenomics experiments: unspecific massively parallel sequencing with the aim of discovering and characterizing the virus fraction of biological samples.
virmet is now called with a command subcommand
virmet fetch --viral n, for example, downloads the viral nucleotide
database. Other available subcommands so far are
fetch: download genomes
update: update viral/bacterial database
index: index genomes
wolfpack: analyze a Miseq run
covplot: plot coverage for a specific organism
A short help is obtained with
virmet <subcommand> -h.
Further detail following the menu on the left.